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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1608
candidate regulatory elements
1288
target gene predictions
965
histone modifications
899
chromatin state
822
accessible chromatin
796
binding sites
610
gene expression
150
eQTL
122
differential activity
120
variant allelic effects
60
Fine-mapped variants
10
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
801
September, 2022
706
February, 2021
89
October, 2022
34
May, 2022
31
August, 2017
8
May, 2019
7
April, 2019
5
February, 2024
5
May, 2021
3
October, 2019
2
January, 2020
2
May, 2020
1
August, 2021
1
November, 2019
Available data
831
bed bed3+
829
bed bed9
34
bed bed9+
30
bigBed bed9
1
bam
1
bigWig
Organism
1695
Homo sapiens
Biosample type
828
cell line
514
tissue
270
primary cell
82
in vitro differentiated cells
1
stem cell
Organ
96
epithelium
88
brain
84
kidney
81
musculature of body
80
lung
79
connective tissue
73
bodily fluid
70
blood
65
intestine
56
heart
54
vasculature
53
skin of body
52
limb
blood vessel
42
large intestine
41
embryo
36
extraembryonic component
30
liver
27
mammary gland
24
stomach
23
bone element
pancreas
21
prostate gland
20
lymph node
20
small intestine
19
placenta
17
penis
15
eye
14
adrenal gland
14
artery
13
ureter
12
adipose tissue
12
thymus
11
gonad
10
spinal cord
8
uterus
8
vein
7
esophagus
7
spleen
7
testis
5
lymphoid tissue
4
bone marrow
4
bronchus
4
lymphatic vessel
4
mouth
4
nerve
4
ovary
4
thyroid gland
3
skeleton
2
breast
2
tongue
2
trachea
2
urinary bladder
2
vagina
1
nose
Project
1695
AMP
Genome assembly (visualization)
1694
hg19
829
GRCh38
1
hg18
organ_slims!
pancreas
blood vessel
BIOSAMPLE
TYPE
1695 results
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Clear Filters
chromatin state
binding sites
cell line
A549
18
2
K562
7
2
breast cancer cell
9
MCF-7
5
3
melanoma
7
+ See 578 more…
tissue
heart
21
1
brain
18
1
stomach
19
kidney
16
1
lung
16
+ See 117 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
mature neutrophil
7
1
CD8-positive, alpha-beta memory T cell
7
+ See 119 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
1
adipocyte
6
1
embryonic stem cell
5
1
neural progenitor cell
4
T-cell acute lymphoblastic leukemia
3
+ See 43 more…
stem cell
H1-hESC
1
See all biosamples
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