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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1608
candidate regulatory elements
1288
target gene predictions
965
histone modifications
899
chromatin state
822
accessible chromatin
796
binding sites
610
gene expression
150
eQTL
122
differential activity
120
variant allelic effects
60
Fine-mapped variants
10
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
801
September, 2022
34
May, 2022
31
August, 2017
10
May, 2021
8
May, 2019
7
April, 2019
5
February, 2024
3
October, 2019
2
January, 2020
2
May, 2020
1
November, 2019
Available data
829
bed bed9
38
bed bed3+
34
bed bed9+
30
bigBed bed9
1
bam
1
bigWig
Organism
904
Homo sapiens
Biosample type
481
tissue
190
primary cell
188
cell line
44
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
53
epithelium
51
heart
50
limb
48
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
904
AMP
Genome assembly (visualization)
904
hg19
829
GRCh38
organ_slims!
pancreas
blood vessel
BIOSAMPLE
TYPE
904 results
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Clear Filters
chromatin state
hQTL
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 100 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 78 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 140 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
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