Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
454
gene expression
447
accessible chromatin
348
target gene predictions
328
candidate regulatory elements
207
histone modifications
chromatin state
122
differential activity
99
binding sites
74
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
449
February, 2021
323
September, 2022
315
November, 2021
281
September, 2023
244
May, 2021
140
February, 2024
86
May, 2020
52
June, 2020
42
August, 2021
37
January, 2022
36
January, 2021
31
October, 2022
21
January, 2020
19
April, 2020
16
February, 2020
16
March, 2023
13
May, 2022
9
November, 2022
5
March, 2020
4
February, 2023
3
November, 2020
2
August, 2018
1
July, 2020
1
March, 2024
Available data
1519
bed bed3+
542
tsv
370
bigWig
108
txt
2
bigBed narrowPeak
Organism
2101
Homo sapiens
Biosample type
2146
primary cell
2130
cell line
2041
tissue
423
in vitro differentiated cells
3
stem cell
Organ
772
epithelium
300
kidney
254
connective tissue
152
vasculature
pancreas
102
blood vessel
82
skin of body
61
liver
47
musculature of body
38
mammary gland
35
penis
32
extraembryonic component
31
brain
29
lung
28
heart
27
artery
23
intestine
20
eye
18
embryo
15
lymphatic vessel
15
vein
14
bronchus
12
bone element
11
adrenal gland
11
bone marrow
11
stomach
9
blood
9
bodily fluid
9
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
gonad
4
small intestine
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1492
AMP
315
ENCODE
281
KPMP
39
T1D
19
LungMap
Genome assembly (visualization)
1534
hg19
520
GRCh38
organ_slims!
pancreas
annotation_type!
chromatin state
BIOSAMPLE
TYPE
2146 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
CD8-positive, alpha-beta T cell
3
4
5
7
30
common myeloid progenitor, CD34-positive
14
27
endothelial cell
9
15
7
1
2
2
1
2
B cell
2
6
10
14
+ See 427 more…
See all biosamples
Download