Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
422
accessible chromatin
407
gene expression
342
target gene predictions
327
candidate regulatory elements
207
histone modifications
197
chromatin state
122
differential activity
93
binding sites
39
eQTL
24
variant allelic effects
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
483
September, 2022
449
February, 2021
315
November, 2021
281
September, 2023
244
May, 2021
February, 2024
86
May, 2020
52
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
36
January, 2021
31
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
16
March, 2023
9
November, 2022
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
August, 2018
2
October, 2019
1
July, 2020
1
March, 2024
Available data
1432
bed bed3+
507
tsv
354
bigWig
164
bed bed9
108
txt
27
bed bed9+
4
bigBed bed9
Organism
2158
Homo sapiens
Biosample type
2522
tissue
2203
primary cell
2150
cell line
438
in vitro differentiated cells
4
stem cell
Organ
759
epithelium
309
kidney
268
connective tissue
153
vasculature
pancreas
100
blood vessel
99
skin of body
45
mammary gland
41
penis
40
extraembryonic component
38
liver
36
musculature of body
35
brain
33
lung
31
heart
29
artery
23
eye
22
embryo
20
intestine
20
vein
17
lymphatic vessel
15
bronchus
14
bone element
13
bone marrow
10
adrenal gland
10
placenta
9
blood
9
bodily fluid
9
prostate gland
9
stomach
8
esophagus
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
2
thyroid gland
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1550
AMP
315
ENCODE
281
KPMP
38
T1D
19
LungMap
Genome assembly (visualization)
1626
hg19
653
GRCh38
organ_slims!
pancreas
month_released!
February, 2024
BIOSAMPLE
TYPE
2203 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
eQTL
variant allelic effects
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
13
8
endothelial cell
14
8
7
1
2
2
+ See 421 more…
See all biosamples
Download