Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
913
candidate regulatory elements
501
target gene predictions
495
chromatin state
176
accessible chromatin
100
eQTL
96
gene expression
86
histone modifications
69
Fine-mapped variants
45
variant allelic effects
32
binding sites
5
differential activity
3
pQTL
2
caQTL
2
variant to gene
1
other
Date released
1340
September, 2022
616
February, 2021
96
March, 2020
59
June, 2020
58
January, 2020
55
May, 2020
52
January, 2022
46
February, 2020
38
August, 2021
27
March, 2024
26
February, 2023
26
May, 2021
17
November, 2022
16
August, 2017
16
February, 2024
9
May, 2019
9
November, 2019
7
April, 2019
4
October, 2019
3
September, 2018
2
May, 2022
1
August, 2020
1
August, 2022
1
January, 2018
Available data
1772
bed bed3+
474
bed bed9
194
tsv
104
bigWig
29
bigBed bed9
1
bam
Organism
2524
Homo sapiens
Biosample type
2526
tissue
2299
primary cell
2282
cell line
464
in vitro differentiated cells
4
stem cell
Organ
349
brain
306
musculature of body
301
kidney
236
limb
232
intestine
214
heart
181
lung
134
large intestine
pancreas
108
stomach
98
extraembryonic component
95
connective tissue
84
adipose tissue
84
blood vessel
84
vasculature
80
small intestine
70
eye
64
ureter
62
adrenal gland
61
epithelium
60
placenta
58
liver
48
thymus
42
artery
39
gonad
36
spinal cord
35
embryo
35
esophagus
34
spleen
25
nerve
25
skin of body
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
mammary gland
2
penis
1
vein
Project
2521
AMP
5
ITG
Genome assembly (visualization)
2356
hg19
698
GRCh38
3
hg18
organ_slims!
pancreas
tongue
mammary gland
BIOSAMPLE
TYPE
2526 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
pQTL
caQTL
variant to gene
other
tissue
heart
37
20
21
5
3
1
2
1
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
1
7
2
1
1
brain
29
16
18
2
2
1
3
1
1
lung
33
17
16
1
1
+ See 248 more…
See all biosamples
Download