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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1647
candidate regulatory elements
1313
target gene predictions
971
histone modifications
848
accessible chromatin
812
binding sites
130
eQTL
129
variant allelic effects
71
chromatin state
34
gene expression
13
caQTL
7
differential activity
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
Date released
2387
February, 2021
1647
September, 2022
315
November, 2021
289
February, 2024
285
June, 2020
279
May, 2021
146
May, 2020
102
January, 2022
101
October, 2022
71
August, 2021
63
January, 2020
49
May, 2022
45
March, 2020
44
November, 2022
36
January, 2021
32
August, 2017
31
February, 2023
19
April, 2020
17
February, 2020
11
November, 2019
7
March, 2023
5
September, 2023
3
October, 2019
3
September, 2018
2
August, 2018
2
November, 2020
1
August, 2020
1
August, 2022
Available data
5764
bed bed3+
bed bed9
tsv
489
bigWig
108
txt
38
bigBed bed9
34
bed bed9+
21
csv
2
bigBed narrowPeak
1
bam
Organism
5947
Homo sapiens
Biosample type
2129
cell line
1867
tissue
1637
primary cell
355
in vitro differentiated cells
4
stem cell
Organ
575
epithelium
354
connective tissue
333
brain
324
kidney
290
musculature of body
240
lung
231
intestine
192
bodily fluid
pancreas
183
blood
180
heart
178
embryo
177
limb
170
vasculature
168
skin of body
139
large intestine
130
blood vessel
114
liver
113
extraembryonic component
98
eye
94
stomach
77
uterus
73
mammary gland
71
bone element
65
small intestine
64
prostate gland
59
adipose tissue
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
artery
51
ureter
40
gonad
38
thymus
36
esophagus
30
spinal cord
27
spleen
21
testis
18
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
15
nerve
15
skeleton
14
bronchus
14
lymphatic vessel
14
mouth
12
bone marrow
12
pituitary gland
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
5608
AMP
315
ENCODE
40
T1D
19
LungMap
7
community
5
ITG
Genome assembly (visualization)
5830
hg19
857
GRCh38
4
hg18
organ_slims!
pancreas
files.file_type!
bed bed9
tsv
BIOSAMPLE
TYPE
5994 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
meQTL
other
pQTL
sQTL
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 756 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
1
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
2
1
lung
33
17
1
+ See 219 more…
primary cell
monocyte
2
86
18
1
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
1
2
1
2
B cell
14
10
6
+ See 333 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
embryonic stem cell
1
1
6
1
mesenchymal stem cell
3
3
1
1
1
+ See 106 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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