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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1577
candidate regulatory elements
1264
target gene predictions
965
histone modifications
822
accessible chromatin
807
binding sites
614
gene expression
148
eQTL
134
differential activity
119
variant allelic effects
66
chromatin state
60
Fine-mapped variants
11
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
2511
February, 2021
1575
September, 2022
348
February, 2024
347
May, 2021
305
November, 2021
286
September, 2023
280
June, 2020
136
May, 2020
112
August, 2021
104
March, 2020
101
October, 2022
99
January, 2022
68
January, 2020
51
February, 2020
49
May, 2022
44
November, 2022
36
January, 2021
32
August, 2017
30
March, 2024
28
February, 2023
23
March, 2023
19
April, 2020
8
November, 2019
3
November, 2020
3
September, 2018
2
August, 2018
2
October, 2019
1
August, 2020
1
August, 2022
1
January, 2018
1
July, 2020
Available data
5591
bed bed3+
bed bed9
793
tsv
467
bigWig
108
txt
34
bed bed9+
28
bigBed bed9
21
csv
2
bigBed narrowPeak
1
bam
Organism
6559
Homo sapiens
Biosample type
2151
primary cell
2133
cell line
1891
tissue
426
in vitro differentiated cells
4
stem cell
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
pancreas
241
lung
234
intestine
234
vasculature
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5950
AMP
305
ENCODE
281
KPMP
40
T1D
19
LungMap
7
community
5
ITG
Genome assembly (visualization)
5739
hg19
912
GRCh38
4
hg18
organ_slims!
pancreas
heart
files.file_type!
bed bed9
BIOSAMPLE
TYPE
6607 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
meQTL
other
pQTL
sQTL
variant to gene
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 422 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 758 more…
tissue
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 236 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 119 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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