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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
222
gene expression
155
accessible chromatin
97
candidate regulatory elements
94
target gene predictions
65
differential activity
41
binding sites
33
variant allelic effects
25
histone modifications
3
chromatin state
3
eQTL
2
caQTL
Date released
186
February, 2021
155
September, 2023
101
November, 2021
97
September, 2022
54
February, 2024
24
June, 2020
23
August, 2021
15
November, 2022
14
May, 2020
12
January, 2020
11
February, 2023
9
February, 2020
9
May, 2021
6
October, 2022
5
April, 2020
5
March, 2020
4
March, 2023
3
August, 2017
2
January, 2021
2
March, 2024
2
May, 2022
1
July, 2020
Available data
448
bed bed3+
274
tsv
123
bigWig
78
txt
bed bed9
3
csv
2
bigBed bed9
1
bigBed narrowPeak
Organism
740
Homo sapiens
Biosample type
649
primary cell
50
tissue
22
in vitro differentiated cells
19
cell line
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
pancreas
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
477
AMP
155
KPMP
101
ENCODE
5
LungMap
2
T1D
Genome assembly (visualization)
449
hg19
145
GRCh38
organ_slims!
pancreas
lung
files.file_type!
bed bed9
BIOSAMPLE
TYPE
740 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
binding sites
variant allelic effects
histone modifications
chromatin state
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
endothelial cell of hepatic sinusoid
4
6
6
+ See 131 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
esophagus squamous epithelium
1
6
2
kidney epithelium
1
1
breast - mammary tissue
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
cell line
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
colon epithelial cell
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 3 more…
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