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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1624
candidate regulatory elements
1292
target gene predictions
956
histone modifications
816
accessible chromatin
799
binding sites
110
variant allelic effects
34
chromatin state
12
caQTL
9
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
Date released
2363
February, 2021
1615
September, 2022
310
November, 2021
279
June, 2020
267
May, 2021
257
February, 2024
127
May, 2020
100
October, 2022
61
January, 2020
47
August, 2021
41
November, 2022
38
March, 2020
36
January, 2021
31
February, 2023
29
August, 2017
19
April, 2020
13
May, 2022
10
November, 2019
5
January, 2022
5
September, 2023
3
October, 2019
2
November, 2020
2
September, 2018
1
August, 2020
1
August, 2022
Available data
5663
bed bed3+
842
bed bed9
794
tsv
466
bigWig
108
txt
37
bigBed bed9
34
bed bed9+
18
csv
2
bigBed narrowPeak
Organism
5617
Homo sapiens
Biosample type
2080
cell line
1746
tissue
1487
primary cell
344
in vitro differentiated cells
4
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5293
AMP
310
ENCODE
40
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5656
hg19
728
GRCh38
organ_slims!
pancreas
liver
BIOSAMPLE
TYPE
5663 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 751 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 204 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 314 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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