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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1590
candidate regulatory elements
1229
target gene predictions
959
histone modifications
799
binding sites
765
accessible chromatin
113
variant allelic effects
35
chromatin state
13
caQTL
9
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
Date released
2332
February, 2021
1593
September, 2022
313
November, 2021
274
June, 2020
265
May, 2021
222
February, 2024
129
May, 2020
100
October, 2022
January, 2020
51
August, 2021
41
November, 2022
40
March, 2020
36
January, 2021
31
February, 2023
30
August, 2017
19
April, 2020
15
May, 2022
11
November, 2019
5
January, 2022
5
September, 2023
3
October, 2019
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
Available data
5523
bed bed3+
823
bed bed9
798
tsv
424
bigWig
108
txt
34
bed bed9+
32
bigBed bed9
21
csv
2
bigBed narrowPeak
1
bam
Organism
5477
Homo sapiens
Biosample type
1995
cell line
1715
tissue
1486
primary cell
322
in vitro differentiated cells
3
stem cell
Organ
535
epithelium
321
connective tissue
295
kidney
291
brain
276
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
embryo
169
limb
165
skin of body
164
heart
pancreas
153
vasculature
137
large intestine
118
blood vessel
112
extraembryonic component
99
liver
96
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
48
ureter
46
adipose tissue
44
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
13
nerve
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5150
AMP
313
ENCODE
40
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5515
hg19
647
GRCh38
1
hg18
organ_slims!
pancreas
embryo
month_released!
January, 2020
BIOSAMPLE
TYPE
5523 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
breast cancer cell
11
9
+ See 736 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
3
2
kidney
29
14
2
1
8
1
1
brain
29
16
3
1
1
1
lung
33
17
+ See 199 more…
primary cell
monocyte
2
86
1
18
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
2
15
2
2
1
+ See 314 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 97 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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