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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
target gene predictions
78
candidate regulatory elements
40
chromatin state
13
accessible chromatin
8
binding sites
7
histone modifications
4
gene expression
3
eQTL
Date released
110
September, 2022
56
February, 2021
54
February, 2024
9
June, 2020
8
November, 2021
7
May, 2021
4
March, 2024
3
August, 2017
3
January, 2022
October, 2022
1
March, 2020
Available data
211
bed bed3+
37
bed bed9
4
bigWig
4
tsv
Organism
255
Homo sapiens
Biosample type
147
tissue
97
cell line
11
primary cell
Organ
943
epithelium
650
kidney
460
brain
448
connective tissue
372
musculature of body
307
lung
288
intestine
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
247
AMP
8
ENCODE
Genome assembly (visualization)
248
hg19
101
GRCh38
organ_slims!
pancreas
month_released!
October, 2022
BIOSAMPLE
TYPE
255 results
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target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
tissue
large intestine
14
27
13
1
1
sigmoid colon
7
10
5
1
transverse colon
5
8
4
1
1
colonic mucosa
2
4
3
1
mucosa of rectum
2
4
3
+ See 11 more…
cell line
HeLa-S3
55
5
3
HT-29
2
2
1
1
1
1
SW480
1
2
1
1
1
1
HCT116
3
2
1
RKO
1
1
1
1
+ See 5 more…
primary cell
colon epithelial cell
3
3
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
See all biosamples
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