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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
227
gene expression
194
candidate regulatory elements
183
accessible chromatin
147
target gene predictions
103
chromatin state
65
differential activity
43
binding sites
42
variant allelic effects
27
histone modifications
9
Fine-mapped variants
8
eQTL
2
caQTL
Date released
285
September, 2022
246
February, 2021
155
September, 2023
110
November, 2021
55
February, 2024
30
June, 2020
24
May, 2020
23
August, 2021
21
January, 2020
15
February, 2020
15
November, 2022
14
March, 2020
12
May, 2021
11
February, 2023
7
April, 2020
6
October, 2022
4
March, 2023
3
August, 2017
3
March, 2024
2
January, 2021
2
January, 2022
2
May, 2019
2
May, 2022
2
November, 2019
1
July, 2020
Available data
639
bed bed3+
291
tsv
145
bigWig
100
bed bed9
78
txt
6
bigBed bed9
3
csv
1
bigBed narrowPeak
Organism
1050
Homo sapiens
Biosample type
710
primary cell
290
tissue
27
cell line
23
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
776
AMP
155
KPMP
110
ENCODE
7
LungMap
2
T1D
Genome assembly (visualization)
752
hg19
282
GRCh38
organ_slims!
pancreas
BIOSAMPLE
TYPE
1050 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
1
8
3
1
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 136 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
tibial nerve
2
6
3
3
4
2
3
2
pigmented layer of retina
20
tibial artery
1
3
3
2
3
2
3
2
+ See 32 more…
cell line
GM23248
2
1
1
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
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