Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1643
candidate regulatory elements
1346
target gene predictions
972
histone modifications
934
chromatin state
910
accessible chromatin
810
binding sites
683
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
823
September, 2022
177
February, 2021
171
September, 2023
95
May, 2021
79
February, 2024
49
August, 2021
38
February, 2020
35
August, 2017
34
May, 2022
30
March, 2024
23
January, 2020
13
March, 2023
11
March, 2020
9
August, 2018
9
May, 2019
8
April, 2019
5
October, 2019
3
May, 2020
2
January, 2018
1
July, 2020
1
November, 2019
1
November, 2020
Available data
859
bed bed9
640
tsv
108
txt
40
bed bed3+
40
bigBed bed9
34
bed bed9+
24
csv
11
bigWig
1
bam
Organism
1617
Homo sapiens
Biosample type
669
primary cell
621
tissue
208
cell line
118
in vitro differentiated cells
1
stem cell
Organ
306
epithelium
279
kidney
97
connective tissue
91
brain
85
musculature of body
72
heart
72
lung
69
vasculature
65
pancreas
62
intestine
55
limb
53
blood vessel
41
liver
38
embryo
38
large intestine
37
skin of body
33
extraembryonic component
28
bodily fluid
26
blood
26
stomach
23
adipose tissue
20
small intestine
19
bone element
16
artery
16
placenta
15
adrenal gland
15
mammary gland
14
prostate gland
13
ureter
11
thymus
10
eye
10
gonad
penis
9
esophagus
9
spinal cord
8
lymph node
7
spleen
6
lymphoid tissue
6
nerve
6
uterus
6
vein
5
lymphatic vessel
5
mouth
5
ovary
5
testis
5
thyroid gland
3
breast
3
skeleton
3
tongue
3
urinary bladder
3
vagina
2
bone marrow
2
bronchus
1
nose
1
pericardium
1
pituitary gland
Project
1446
AMP
171
KPMP
Genome assembly (visualization)
946
hg19
868
GRCh38
organ_slims!
penis
BIOSAMPLE
TYPE
1617 results
search-icon
table-tab-icon
Clear Filters
chromatin state
gene expression
primary cell
epithelial cell of proximal tubule
1
16
glomerular endothelial cell
1
14
monocyte
15
hepatocyte
1
13
common myeloid progenitor, CD34-positive
13
+ See 241 more…
tissue
heart
21
3
kidney
16
7
stomach
19
1
brain
18
1
lung
16
1
+ See 147 more…
cell line
A549
18
H1-hESC
1
8
EndoC_BH1
8
K562
7
MCF-7
5
+ See 145 more…
in vitro differentiated cells
cardiomyocytes
11
hematopoietic multipotent progenitor cell
10
1
neural progenitor cell
4
7
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
+ See 35 more…
stem cell
H1-hESC
1
See all biosamples
Download