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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
882
histone modifications
770
binding sites
698
candidate regulatory elements
685
target gene predictions
432
accessible chromatin
419
chromatin state
402
gene expression
90
variant allelic effects
54
eQTL
43
differential activity
9
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Date released
1914
February, 2021
1092
September, 2022
357
May, 2021
351
February, 2024
219
June, 2020
95
October, 2022
94
May, 2020
82
August, 2021
55
March, 2023
50
January, 2022
47
May, 2022
26
January, 2020
24
March, 2020
21
November, 2022
16
August, 2017
16
February, 2020
9
August, 2018
9
October, 2019
5
February, 2023
5
September, 2023
4
November, 2019
3
November, 2020
2
March, 2024
1
July, 2020
1
June, 2021
Available data
3578
bed bed3+
405
tsv
369
bed bed9
154
bigWig
108
txt
34
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
4453
Homo sapiens
Biosample type
tissue
2318
cell line
1717
primary cell
458
in vitro differentiated cells
4
stem cell
Organ
577
epithelium
293
connective tissue
214
bodily fluid
208
kidney
204
blood
178
embryo
169
skin of body
138
vasculature
123
pancreas
118
lung
117
brain
95
blood vessel
93
liver
79
mammary gland
68
uterus
64
bone element
63
prostate gland
62
lymph node
penis
58
musculature of body
45
extraembryonic component
38
intestine
eye
34
large intestine
31
heart
28
artery
22
vein
13
bronchus
12
lymphatic vessel
11
placenta
10
bone marrow
10
pituitary gland
9
gonad
8
limb
8
mouth
8
testis
7
spinal cord
6
esophagus
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
2
stomach
1
adrenal gland
1
pericardium
1
thyroid gland
Project
4498
AMP
329
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
Genome assembly (visualization)
3999
hg19
786
GRCh38
1
hg18
organ_slims!
penis
eye
biosample_type!
tissue
BIOSAMPLE
TYPE
4498 results
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Clear Filters
histone modifications
binding sites
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
variant allelic effects
eQTL
differential activity
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
cell line
HeLa-S3
1
5
55
3
A549
1
2
21
19
1
18
H1-hESC
1
2
1
39
1
1
8
K562
1
2
7
23
1
7
MCF-7
2
3
9
6
1
5
+ See 758 more…
primary cell
monocyte
86
1
1
17
15
4
2
1
1
common myeloid progenitor, CD34-positive
27
14
13
CD8-positive, alpha-beta T cell
30
7
3
2
1
3
B cell
14
10
2
8
2
CD4-positive, alpha-beta memory T cell
14
9
9
+ See 315 more…
in vitro differentiated cells
neural progenitor cell
15
5
5
10
4
7
hematopoietic multipotent progenitor cell
1
1
19
10
1
10
1
adipocyte
1
1
4
6
4
6
1
embryonic stem cell
1
1
1
6
5
cardiomyocytes
11
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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