Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
477
gene expression
431
accessible chromatin
372
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
100
binding sites
81
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
487
September, 2022
456
February, 2021
333
November, 2021
281
September, 2023
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
31
October, 2022
23
January, 2020
19
April, 2020
15
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1543
bed bed3+
591
tsv
410
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2372
Homo sapiens
Biosample type
2586
tissue
2417
primary cell
2190
cell line
449
in vitro differentiated cells
4
stem cell
Organ
804
epithelium
304
kidney
272
connective tissue
166
vasculature
125
pancreas
111
blood vessel
98
skin of body
61
liver
50
musculature of body
44
mammary gland
40
penis
37
extraembryonic component
34
brain
34
lung
31
heart
27
artery
23
intestine
21
eye
20
embryo
19
vein
17
lymphatic vessel
15
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
prostate gland
9
placenta
8
blood
8
bodily fluid
6
large intestine
4
mouth
4
small intestine
4
spinal cord
4
trachea
4
uterus
3
gonad
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
pericardium
1
testis
1
thymus
Project
1723
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1751
hg19
707
GRCh38
organ_slims!
pituitary gland
pericardium
month_released!
June, 2020
BIOSAMPLE
TYPE
2417 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
16
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
14
8
endothelial cell
9
15
7
1
2
2
1
2
+ See 443 more…
See all biosamples
Download