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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
68
candidate regulatory elements
42
target gene predictions
36
chromatin state
6
binding sites
5
histone modifications
3
accessible chromatin
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
127
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
164
Homo sapiens
Biosample type
130
tissue
28
cell line
6
primary cell
Organ
848
epithelium
636
kidney
444
brain
422
connective tissue
354
musculature of body
304
lung
273
intestine
248
pancreas
245
heart
243
vasculature
238
limb
195
skin of body
185
blood vessel
178
bodily fluid
167
blood
164
large intestine
154
embryo
140
extraembryonic component
122
liver
114
stomach
102
eye
86
adipose tissue
84
bone element
83
small intestine
82
mammary gland
72
artery
72
prostate gland
71
adrenal gland
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
41
esophagus
41
spinal cord
33
spleen
30
uterus
24
nerve
24
testis
22
ovary
22
vein
21
lymphoid tissue
21
thyroid gland
20
lymphatic vessel
18
mouth
18
skeleton
14
bronchus
13
bone marrow
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
158
AMP
6
ENCODE
Genome assembly (visualization)
160
hg19
41
GRCh38
organ_slims!
pituitary gland
month_released!
June, 2020
February, 2024
BIOSAMPLE
TYPE
164 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
tissue
large intestine
26
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
1
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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