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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
962
histone modifications
877
accessible chromatin
809
binding sites
792
candidate regulatory elements
662
gene expression
509
target gene predictions
167
differential activity
162
eQTL
130
variant allelic effects
96
chromatin state
65
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2524
February, 2021
September, 2022
384
May, 2021
373
February, 2024
321
November, 2021
286
September, 2023
282
June, 2020
144
May, 2020
120
August, 2021
113
March, 2020
102
January, 2022
100
October, 2022
77
January, 2020
70
March, 2023
56
January, 2021
53
February, 2020
49
May, 2022
44
November, 2022
35
August, 2017
30
March, 2024
29
February, 2023
19
April, 2020
12
October, 2019
11
November, 2019
9
August, 2018
8
May, 2019
3
November, 2020
3
September, 2018
2
April, 2019
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4120
bed bed3+
869
tsv
518
bigWig
108
txt
34
bed bed9+
30
bigBed bed9
26
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
5218
Homo sapiens
Biosample type
1953
primary cell
1801
cell line
1142
tissue
364
in vitro differentiated cells
4
stem cell
Organ
798
epithelium
427
kidney
338
connective tissue
286
brain
233
pancreas
191
vasculature
171
musculature of body
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4571
AMP
321
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4308
hg19
972
GRCh38
4
hg18
organ_slims!
placenta
heart
month_released!
September, 2022
BIOSAMPLE
TYPE
5266 results
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Clear Filters
histone modifications
accessible chromatin
binding sites
candidate regulatory elements
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
2
9
7
1
2
2
hepatocyte
4
8
1
13
2
2
fibroblast
16
1
4
2
6
+ See 428 more…
cell line
HeLa-S3
1
2
52
H1-hESC
1
1
2
8
38
EndoC_BH1
1
8
1
8
1
3
1
K562
1
1
2
1
17
1
breast cancer cell
11
9
+ See 744 more…
tissue
islet of Langerhans
1
5
2
11
1
13
1
3
2
2
2
kidney
2
10
1
15
7
1
1
2
retina
1
23
1
3
1
1
1
stomach
1
3
21
1
2
1
liver
2
4
1
6
1
3
1
7
2
1
+ See 242 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
1
2
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
1
9
1
cardiomyocytes
11
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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