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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
80
candidate regulatory elements
58
target gene predictions
46
chromatin state
35
accessible chromatin
26
gene expression
25
binding sites
23
histone modifications
11
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
130
September, 2022
74
February, 2021
30
February, 2024
15
November, 2021
11
June, 2020
10
August, 2021
10
March, 2020
7
May, 2021
4
August, 2017
4
January, 2022
4
March, 2023
3
January, 2020
3
May, 2020
3
October, 2022
2
February, 2020
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
229
bed bed3+
42
bed bed9
30
tsv
28
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
317
Homo sapiens
Biosample type
128
primary cell
95
cell line
81
tissue
13
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
placenta
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
302
AMP
15
ENCODE
Genome assembly (visualization)
280
hg19
101
GRCh38
2
hg18
organ_slims!
placenta
penis
BIOSAMPLE
TYPE
317 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
3
1
8
13
1
4
2
keratinocyte
3
5
3
2
1
2
1
endothelial cell of hepatic sinusoid
6
4
6
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 11 more…
cell line
HepG2
2
3
2
2
3
5
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
+ See 18 more…
tissue
liver
13
10
9
4
1
1
2
7
1
1
lower leg skin
6
2
2
right lobe of liver
2
1
1
1
1
3
skin of body
1
1
1
3
suprapubic skin
3
+ See 3 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
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