Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
453
accessible chromatin
431
gene expression
366
target gene predictions
327
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
94
binding sites
41
eQTL
25
variant allelic effects
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
487
September, 2022
456
February, 2021
333
November, 2021
281
September, 2023
256
May, 2021
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
31
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1492
bed bed3+
556
tsv
385
bigWig
164
bed bed9
108
txt
27
bed bed9+
5
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2274
Homo sapiens
Biosample type
2608
tissue
2319
primary cell
2184
cell line
438
in vitro differentiated cells
4
stem cell
Organ
759
epithelium
309
kidney
270
connective tissue
153
vasculature
114
pancreas
100
blood vessel
99
skin of body
45
mammary gland
41
penis
40
extraembryonic component
38
liver
36
musculature of body
35
brain
33
lung
31
heart
29
artery
23
eye
22
embryo
20
intestine
20
vein
17
lymphatic vessel
15
bronchus
14
bone element
13
bone marrow
10
adrenal gland
10
placenta
9
blood
9
bodily fluid
9
prostate gland
9
stomach
8
esophagus
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
2
thyroid gland
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1626
AMP
333
ENCODE
281
KPMP
58
T1D
19
LungMap
2
community
Genome assembly (visualization)
1686
hg19
676
GRCh38
organ_slims!
skeleton
month_released!
February, 2024
BIOSAMPLE
TYPE
2319 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
eQTL
variant allelic effects
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
13
8
endothelial cell
14
8
7
1
2
2
+ See 439 more…
See all biosamples
Download