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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1650
candidate regulatory elements
1343
target gene predictions
976
histone modifications
chromatin state
900
accessible chromatin
814
binding sites
681
gene expression
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2566
February, 2021
1656
September, 2022
380
May, 2021
366
February, 2024
331
November, 2021
286
September, 2023
285
June, 2020
152
May, 2020
127
March, 2020
101
August, 2021
100
October, 2022
83
January, 2020
69
March, 2023
56
January, 2021
44
November, 2022
38
February, 2020
32
February, 2023
28
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
5
January, 2022
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5821
bed bed3+
871
tsv
535
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6735
Homo sapiens
Biosample type
2225
primary cell
2145
cell line
1981
tissue
426
in vitro differentiated cells
3
stem cell
Organ
893
epithelium
571
kidney
391
connective tissue
365
brain
294
musculature of body
245
pancreas
239
lung
227
intestine
227
vasculature
198
heart
189
bodily fluid
189
limb
187
embryo
180
blood
170
blood vessel
166
skin of body
136
large intestine
131
liver
112
extraembryonic component
99
eye
94
stomach
78
uterus
74
bone element
72
mammary gland
66
adipose tissue
64
prostate gland
63
small intestine
62
artery
58
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
gonad
38
thymus
35
esophagus
33
spinal cord
27
spleen
20
testis
19
lymphatic vessel
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
18
vein
skeleton
14
bronchus
14
mouth
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
6080
AMP
331
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
2
ITG
Genome assembly (visualization)
5905
hg19
866
GRCh38
1
hg18
organ_slims!
skeleton
gonad
annotation_type!
eQTL
chromatin state
BIOSAMPLE
TYPE
6782 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
2
2
B cell
14
10
6
2
+ See 437 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
EndoC_BH1
1
1
8
1
8
3
1
+ See 762 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
kidney
29
14
2
10
1
7
1
brain
29
16
3
2
1
1
1
lung
33
17
1
+ See 237 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 121 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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