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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1597
candidate regulatory elements
1305
target gene predictions
971
histone modifications
890
chromatin state
879
accessible chromatin
812
binding sites
662
gene expression
167
differential activity
163
eQTL
130
variant allelic effects
65
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
794
September, 2022
35
August, 2017
34
May, 2022
8
May, 2019
5
January, 2020
5
May, 2021
4
October, 2019
2
April, 2019
2
May, 2020
1
November, 2019
Available data
820
bed bed9
35
bed bed3+
34
bed bed9+
30
bigBed bed9
1
bam
1
bigWig
Organism
890
Homo sapiens
Biosample type
460
tissue
194
primary cell
191
cell line
44
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
53
epithelium
heart
50
limb
48
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
890
AMP
Genome assembly (visualization)
890
hg19
815
GRCh38
organ_slims!
skeleton
heart
BIOSAMPLE
TYPE
890 results
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Clear Filters
chromatin state
tissue
stomach
19
brain
18
kidney
16
lung
16
muscle of arm
16
+ See 99 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 82 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 143 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
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