Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
binding sites
579
histone modifications
384
target gene predictions
300
candidate regulatory elements
177
chromatin state
161
accessible chromatin
21
gene expression
10
differential activity
10
eQTL
4
variant allelic effects
Date released
712
February, 2021
500
September, 2022
168
February, 2024
150
June, 2020
62
May, 2021
10
January, 2022
9
March, 2023
8
August, 2021
7
March, 2020
7
May, 2022
5
August, 2017
2
May, 2020
2
October, 2022
1
February, 2023
1
January, 2020
1
March, 2024
1
November, 2019
Available data
1433
bed bed3+
165
bed bed9
22
tsv
7
bed bed9+
4
bigWig
Organism
1646
Homo sapiens
Biosample type
2593
tissue
2275
primary cell
1646
cell line
426
in vitro differentiated cells
4
stem cell
Organ
161
bodily fluid
152
blood
117
embryo
90
lung
68
brain
64
uterus
skin of body
50
lymph node
47
bone element
47
prostate gland
39
kidney
35
epithelium
33
mammary gland
33
pancreas
29
intestine
29
large intestine
25
connective tissue
23
liver
16
musculature of body
15
penis
10
pituitary gland
7
eye
7
heart
7
vasculature
6
limb
6
lymphoid tissue
5
gonad
5
testis
4
blood vessel
4
mouth
3
artery
3
extraembryonic component
3
placenta
2
adipose tissue
1
lymphatic vessel
1
spinal cord
1
vein
Project
1637
AMP
9
community
Genome assembly (visualization)
1605
hg19
351
GRCh38
organ_slims!
skin of body
annotation_type!
binding sites
BIOSAMPLE
TYPE
1646 results
search-icon
table-tab-icon
Clear Filters
histone modifications
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
cell line
HeLa-S3
55
5
3
A549
1
19
21
18
1
H1-hESC
1
39
1
1
1
8
K562
1
23
7
7
1
MCF-7
2
6
9
5
1
+ See 612 more…
See all biosamples
Download