Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
468
gene expression
343
target gene predictions
290
candidate regulatory elements
206
histone modifications
179
chromatin state
152
differential activity
94
binding sites
88
accessible chromatin
76
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
433
September, 2022
424
February, 2021
281
September, 2023
239
May, 2021
126
February, 2024
106
November, 2021
55
March, 2023
51
June, 2020
40
May, 2020
36
January, 2022
33
May, 2022
29
August, 2021
28
January, 2021
28
October, 2022
16
February, 2020
9
August, 2018
9
November, 2022
5
August, 2017
5
March, 2020
4
February, 2023
2
January, 2020
2
May, 2024
2
October, 2019
1
July, 2020
1
March, 2024
November, 2020
Available data
1510
bed bed3+
590
tsv
bigWig
147
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1964
Homo sapiens
Biosample type
2507
tissue
2278
cell line
1965
primary cell
449
in vitro differentiated cells
4
stem cell
Organ
668
epithelium
291
kidney
236
connective tissue
147
vasculature
100
blood vessel
skin of body
86
pancreas
43
liver
43
mammary gland
41
penis
38
musculature of body
37
extraembryonic component
27
artery
27
brain
25
heart
25
lung
20
embryo
19
vein
18
eye
14
bronchus
14
lymphatic vessel
12
bone element
12
intestine
11
bone marrow
10
prostate gland
9
blood
9
bodily fluid
8
esophagus
8
placenta
6
stomach
5
adrenal gland
5
trachea
4
mouth
4
spinal cord
4
uterus
3
gonad
3
large intestine
2
small intestine
2
thyroid gland
1
adipose tissue
1
limb
1
ovary
1
pericardium
1
testis
Project
1545
AMP
281
KPMP
106
ENCODE
31
T1D
2
community
Genome assembly (visualization)
1307
hg19
405
GRCh38
organ_slims!
skin of body
files.file_type!
bigWig
month_released!
November, 2020
BIOSAMPLE
TYPE
1965 results
search-icon
table-tab-icon
Clear Filters
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
accessible chromatin
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
2
86
1
2
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
5
7
30
1
B cell
2
10
14
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 399 more…
See all biosamples
Download