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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1559
candidate regulatory elements
1290
target gene predictions
963
histone modifications
887
accessible chromatin
799
binding sites
123
variant allelic effects
38
chromatin state
24
gene expression
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2323
February, 2021
1572
September, 2022
319
November, 2021
316
February, 2024
279
June, 2020
279
May, 2021
135
May, 2020
97
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
44
March, 2020
41
November, 2022
32
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5694
bed bed3+
898
tsv
816
bed bed9
539
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5672
Homo sapiens
Biosample type
2069
cell line
1773
tissue
1508
primary cell
362
in vitro differentiated cells
4
stem cell
Organ
553
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
skin of body
163
vasculature
162
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
104
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5319
AMP
319
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5686
hg19
786
GRCh38
1
hg18
organ_slims!
skin of body
small intestine
BIOSAMPLE
TYPE
5718 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
gene expression
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 740 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 209 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 314 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
extended pluripotent stem (EPS) cells
9
mesenchymal stem cell
3
3
1
1
1
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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