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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
266
gene expression
213
accessible chromatin
119
target gene predictions
94
candidate regulatory elements
94
differential activity
51
chromatin state
43
variant allelic effects
38
binding sites
24
histone modifications
16
eQTL
6
Fine-mapped variants
2
caQTL
Date released
193
February, 2021
155
September, 2023
142
September, 2022
119
November, 2021
77
February, 2024
38
March, 2023
36
May, 2021
29
August, 2021
24
June, 2020
20
January, 2021
18
January, 2020
18
May, 2020
16
November, 2022
14
February, 2020
14
March, 2020
12
February, 2023
7
April, 2020
6
August, 2018
6
October, 2022
5
October, 2019
4
August, 2017
3
January, 2022
2
March, 2024
2
May, 2022
2
September, 2018
1
January, 2018
1
July, 2020
1
November, 2019
Available data
535
bed bed3+
346
tsv
177
bigWig
78
txt
47
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
966
Homo sapiens
Biosample type
759
primary cell
145
tissue
40
cell line
22
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
663
AMP
155
KPMP
119
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
597
hg19
238
GRCh38
2
hg18
organ_slims!
skin of body
thymus
BIOSAMPLE
TYPE
966 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
+ See 139 more…
tissue
adipose tissue
3
2
8
7
6
1
1
4
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
omental fat pad
2
2
2
5
2
2
3
breast epithelium
1
3
5
2
+ See 23 more…
cell line
EndoC_BH1
8
8
1
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 3 more…
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