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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
252
gene expression
203
accessible chromatin
104
target gene predictions
92
differential activity
75
candidate regulatory elements
41
chromatin state
40
variant allelic effects
35
binding sites
23
histone modifications
3
eQTL
2
caQTL
Date released
169
February, 2021
155
September, 2023
118
September, 2022
114
November, 2021
75
February, 2024
38
March, 2023
33
May, 2021
23
August, 2021
23
June, 2020
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
8
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
2
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
480
bed bed3+
324
tsv
169
bigWig
78
txt
39
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
870
Homo sapiens
Biosample type
751
primary cell
61
tissue
37
cell line
21
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
572
AMP
155
KPMP
114
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
522
hg19
210
GRCh38
organ_slims!
skin of body
urinary bladder
heart
BIOSAMPLE
TYPE
870 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
differential activity
candidate regulatory elements
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
+ See 135 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
8
1
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
glomerular visceral epithelial cell
1
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 2 more…
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