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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
123
candidate regulatory elements
114
target gene predictions
76
binding sites
73
chromatin state
64
accessible chromatin
49
histone modifications
41
gene expression
19
eQTL
16
variant allelic effects
8
differential activity
6
Fine-mapped variants
2
caQTL
Date released
189
September, 2022
179
February, 2021
46
February, 2024
32
June, 2020
31
October, 2022
20
May, 2021
10
January, 2020
10
May, 2020
9
August, 2017
9
August, 2021
9
February, 2020
9
March, 2020
7
March, 2023
7
November, 2022
6
January, 2022
3
May, 2022
3
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
455
bed bed3+
64
bed bed9
49
tsv
19
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
591
Homo sapiens
Biosample type
226
cell line
220
primary cell
94
tissue
50
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
591
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
534
hg19
123
GRCh38
2
hg18
organ_slims!
small intestine
BIOSAMPLE
TYPE
591 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
cell line
K562
7
23
2
7
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 35 more…
primary cell
osteoblast
2
2
3
1
5
2
2
fibroblast of lung
6
4
2
4
foreskin fibroblast
6
2
4
1
1
2
fibroblast of dermis
4
4
1
3
fibroblast
1
2
2
6
+ See 39 more…
tissue
adipose tissue
7
8
1
6
2
3
4
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
bone tissue
4
+ See 8 more…
in vitro differentiated cells
adipocyte
4
6
1
6
4
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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