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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
106
accessible chromatin
96
candidate regulatory elements
67
target gene predictions
56
chromatin state
41
gene expression
37
binding sites
29
histone modifications
18
eQTL
18
variant allelic effects
8
differential activity
6
Fine-mapped variants
2
caQTL
Date released
144
September, 2022
125
February, 2021
29
November, 2022
25
February, 2023
25
June, 2020
19
February, 2024
16
May, 2021
14
October, 2022
12
January, 2020
12
May, 2020
11
February, 2020
9
March, 2020
7
August, 2017
7
August, 2021
7
March, 2023
6
January, 2022
3
May, 2022
3
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
August, 2018
1
January, 2018
1
June, 2021
Available data
364
bed bed3+
51
bigWig
50
tsv
49
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
484
Homo sapiens
Biosample type
226
primary cell
161
tissue
56
in vitro differentiated cells
40
cell line
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
484
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
426
hg19
83
GRCh38
2
hg18
organ_slims!
small intestine
BIOSAMPLE
TYPE
484 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
fibroblast of dermis
4
4
3
1
fibroblast
2
1
2
6
+ See 40 more…
tissue
retina
23
6
3
3
1
1
1
1
1
adipose tissue
2
7
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
pigmented layer of retina
20
omental fat pad
2
5
2
2
2
2
3
+ See 10 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
fibroblast
1
1
+ See 9 more…
cell line
WERI-Rb-1
1
2
1
1
2
1
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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