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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
482
accessible chromatin
478
gene expression
373
target gene predictions
328
candidate regulatory elements
210
histone modifications
198
chromatin state
152
differential activity
binding sites
81
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
487
September, 2022
385
February, 2021
329
November, 2021
282
September, 2023
256
May, 2021
146
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
8
October, 2022
7
August, 2017
7
March, 2020
7
October, 2019
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1495
bed bed3+
591
tsv
408
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2326
Homo sapiens
Biosample type
2536
tissue
2367
primary cell
1709
cell line
432
in vitro differentiated cells
4
stem cell
Organ
789
epithelium
308
kidney
263
connective tissue
153
vasculature
125
pancreas
100
blood vessel
94
skin of body
56
liver
45
musculature of body
39
mammary gland
38
extraembryonic component
37
penis
34
brain
32
lung
29
heart
24
artery
23
intestine
22
embryo
21
eye
18
vein
17
lymphatic vessel
14
bronchus
12
bone element
11
adrenal gland
11
bone marrow
11
stomach
10
esophagus
10
prostate gland
8
placenta
7
blood
7
bodily fluid
6
large intestine
4
gonad
4
mouth
small intestine
4
spinal cord
4
uterus
3
thyroid gland
3
trachea
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1681
AMP
329
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1703
hg19
697
GRCh38
organ_slims!
small intestine
annotation_type!
binding sites
BIOSAMPLE
TYPE
2371 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
14
8
endothelial cell
15
9
7
1
2
1
2
+ See 443 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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