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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
53
candidate regulatory elements
48
gene expression
46
accessible chromatin
44
target gene predictions
33
chromatin state
31
differential activity
16
eQTL
11
variant allelic effects
9
histone modifications
8
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
92
September, 2022
49
February, 2021
45
March, 2023
34
May, 2021
25
February, 2024
9
March, 2020
8
August, 2021
7
August, 2018
6
June, 2020
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
175
bed bed3+
76
tsv
36
bigWig
29
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
308
Homo sapiens
Biosample type
174
tissue
96
primary cell
35
cell line
3
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
308
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
218
hg19
60
GRCh38
organ_slims!
spinal cord
BIOSAMPLE
TYPE
308 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
differential activity
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
sQTL
variant to gene
tissue
placenta
26
1
15
14
1
2
1
islet of Langerhans
11
6
1
3
13
1
1
2
2
2
2
body of pancreas
8
2
5
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
7
4
4
+ See 7 more…
primary cell
pancreatic ductal cell
3
3
1
3
1
2
1
pancreatic beta cell
3
4
1
3
1
pancreatic alpha cell
3
3
1
3
1
pancreatic acinar cell
3
2
1
3
1
pancreatic delta cell
3
2
1
3
1
+ See 12 more…
cell line
EndoC_BH1
8
8
1
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
HTR-8/Svneo
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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