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Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
19
target gene predictions
15
chromatin state
14
candidate regulatory elements
7
accessible chromatin
3
binding sites
1
variant allelic effects
Date released
42
September, 2022
February, 2021
6
November, 2021
4
June, 2020
3
October, 2022
2
May, 2021
1
August, 2017
1
February, 2024
Available data
45
bed bed3+
14
bed bed9
3
bigWig
Organism
59
Homo sapiens
Biosample type
34
primary cell
24
cell line
1
in vitro differentiated cells
Organ
514
epithelium
308
connective tissue
306
kidney
290
brain
269
musculature of body
240
lung
215
intestine
180
heart
176
pancreas
169
limb
157
vasculature
152
embryo
143
bodily fluid
136
blood
134
skin of body
126
large intestine
123
blood vessel
113
extraembryonic component
106
liver
90
eye
88
stomach
71
uterus
66
small intestine
59
mammary gland
58
adrenal gland
55
placenta
53
bone element
52
adipose tissue
48
prostate gland
46
ureter
45
artery
38
thymus
36
gonad
36
penis
35
lymph node
33
esophagus
spinal cord
23
spleen
18
lymphoid tissue
18
ovary
18
thyroid gland
17
testis
16
nerve
15
vein
14
mouth
11
bronchus
11
lymphatic vessel
11
pituitary gland
9
breast
9
skeleton
8
bone marrow
8
urinary bladder
7
tongue
7
vagina
4
nose
1
pericardium
1
trachea
Project
53
AMP
6
ENCODE
Genome assembly (visualization)
59
hg19
20
GRCh38
organ_slims!
spinal cord
month_released!
February, 2021
files.file_type!
tsv
BIOSAMPLE
TYPE
59 results
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Clear Filters
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
binding sites
variant allelic effects
primary cell
mammary gland epithelial cell
4
3
3
1
1
luminal epithelial cell of mammary gland
3
1
1
2
myoepithelial cell of mammary gland
2
2
2
fibroblast of mammary gland
1
1
1
1
1
mammary epithelial cell
1
1
1
1
cell line
MCF-7
6
5
5
1
1
T47D
2
2
2
in vitro differentiated cells
mammary gland epithelial cell
1
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