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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
236
gene expression
185
accessible chromatin
119
target gene predictions
95
candidate regulatory elements
92
differential activity
51
chromatin state
37
binding sites
28
histone modifications
15
variant allelic effects
2
caQTL
1
eQTL
Date released
193
February, 2021
155
September, 2023
145
September, 2022
127
November, 2021
February, 2024
38
March, 2023
33
May, 2021
24
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
May, 2022
1
July, 2020
1
March, 2024
1
November, 2019
Available data
480
bed bed3+
308
tsv
143
bigWig
78
txt
48
bed bed9
4
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
861
Homo sapiens
Biosample type
759
primary cell
43
cell line
39
tissue
20
in vitro differentiated cells
Organ
873
epithelium
651
kidney
465
brain
442
connective tissue
360
musculature of body
310
lung
283
intestine
252
pancreas
250
heart
249
vasculature
244
limb
203
skin of body
190
bodily fluid
189
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
127
liver
117
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
32
uterus
testis
25
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
550
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
528
hg19
200
GRCh38
organ_slims!
testis
breast
month_released!
February, 2024
BIOSAMPLE
TYPE
861 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
histone modifications
variant allelic effects
caQTL
eQTL
primary cell
endothelial cell
8
14
7
2
1
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
hepatocyte
8
3
3
1
1
1
4
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 143 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
tissue
pigmented layer of retina
19
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
corneal epithelium
1
esophagus - mucosa
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 2 more…
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