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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
22
accessible chromatin
21
candidate regulatory elements
20
gene expression
20
target gene predictions
16
chromatin state
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
43
September, 2022
26
February, 2024
25
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
96
bed bed3+
24
tsv
21
bigWig
13
bed bed9
1
bam
1
bigBed bed9
Organism
146
Homo sapiens
Biosample type
61
primary cell
57
tissue
28
cell line
in vitro differentiated cells
Organ
909
epithelium
637
kidney
433
brain
401
connective tissue
368
musculature of body
311
lung
289
intestine
270
pancreas
248
vasculature
242
heart
237
limb
218
bodily fluid
207
blood
195
skin of body
193
blood vessel
185
embryo
174
large intestine
146
liver
141
extraembryonic component
119
stomach
101
eye
89
bone element
84
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
62
lymph node
61
ureter
58
penis
50
gonad
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
141
AMP
5
ENCODE
Genome assembly (visualization)
118
hg19
57
GRCh38
2
hg18
organ_slims!
thymus
biosample_type!
in vitro differentiated cells
month_released!
January, 2020
BIOSAMPLE
TYPE
146 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
7
1
13
3
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
2
1
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
13
1
10
9
2
1
7
1
1
right lobe of liver
2
1
1
1
3
cell line
HepG2
2
2
3
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
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