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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1226
candidate regulatory elements
893
target gene predictions
676
chromatin state
674
binding sites
667
histone modifications
349
accessible chromatin
125
gene expression
119
eQTL
65
Fine-mapped variants
47
variant allelic effects
14
differential activity
4
variant to gene
3
pQTL
2
other
2
sQTL
1
caQTL
Date released
1914
February, 2021
1856
September, 2022
212
June, 2020
193
February, 2024
101
March, 2020
92
May, 2021
70
October, 2022
63
January, 2022
56
January, 2020
54
August, 2021
54
May, 2020
45
February, 2020
28
March, 2024
26
February, 2023
25
August, 2017
17
November, 2022
15
March, 2023
9
May, 2022
9
November, 2019
8
April, 2019
8
May, 2019
3
October, 2019
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3887
bed bed3+
638
bed bed9
215
tsv
115
bigWig
25
bigBed bed9
7
bed bed9+
1
bam
Organism
4864
Homo sapiens
Biosample type
2520
tissue
2341
cell line
primary cell
in vitro differentiated cells
4
stem cell
Organ
427
brain
342
kidney
323
musculature of body
277
lung
266
intestine
243
limb
223
heart
209
bodily fluid
198
blood
168
large intestine
163
embryo
148
pancreas
127
connective tissue
108
stomach
104
epithelium
101
extraembryonic component
95
skin of body
vasculature
90
blood vessel
87
adipose tissue
86
liver
80
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
62
lymph node
thymus
46
artery
46
gonad
39
spinal cord
38
mammary gland
35
esophagus
34
spleen
25
nerve
25
testis
24
lymphoid tissue
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
4852
AMP
9
community
5
ITG
1
T1D
Genome assembly (visualization)
4642
hg19
1048
GRCh38
4
hg18
organ_slims!
thymus
vasculature
biosample_type!
in vitro differentiated cells
primary cell
BIOSAMPLE
TYPE
4867 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
other
sQTL
caQTL
tissue
heart
37
20
21
1
1
5
3
2
stomach
40
21
19
1
3
1
1
kidney
29
14
16
1
2
10
7
1
1
brain
29
16
18
1
3
2
1
2
1
lung
33
17
16
1
1
+ See 251 more…
cell line
HeLa-S3
5
55
3
1
A549
21
19
18
2
1
1
H1-hESC
1
39
1
2
1
1
8
K562
7
23
7
2
1
1
MCF-7
9
6
5
3
2
1
+ See 761 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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