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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
964
histone modifications
809
binding sites
804
accessible chromatin
746
candidate regulatory elements
503
target gene predictions
481
gene expression
167
eQTL
111
differential activity
106
chromatin state
74
Fine-mapped variants
61
variant allelic effects
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Date released
2391
February, 2021
September, 2022
388
May, 2021
377
February, 2024
329
November, 2021
273
June, 2020
146
September, 2023
May, 2020
124
March, 2020
105
January, 2022
100
August, 2021
99
October, 2022
75
January, 2020
70
March, 2023
56
January, 2021
55
February, 2020
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
28
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
8
May, 2019
7
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3950
bed bed3+
649
tsv
455
bigWig
35
bigBed bed9
34
bed bed9+
31
bed bed9
24
csv
21
txt
15
bigBed narrowPeak
1
bam
Organism
4860
Homo sapiens
Biosample type
1789
cell line
1621
primary cell
1089
tissue
357
in vitro differentiated cells
4
stem cell
Organ
783
epithelium
kidney
330
connective tissue
267
brain
227
pancreas
176
vasculature
166
musculature of body
143
bodily fluid
138
blood
136
heart
134
embryo
133
blood vessel
125
intestine
107
liver
102
skin of body
101
lung
96
limb
80
eye
76
large intestine
71
uterus
62
adipose tissue
50
stomach
49
artery
47
extraembryonic component
46
bone element
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
24
esophagus
22
ureter
19
spinal cord
16
spleen
15
lymphatic vessel
thymus
15
vein
14
testis
13
nerve
13
pituitary gland
11
ovary
11
thyroid gland
10
bronchus
9
bone marrow
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4297
AMP
329
ENCODE
141
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4152
hg19
993
GRCh38
4
hg18
organ_slims!
thymus
kidney
month_released!
September, 2022
May, 2020
BIOSAMPLE
TYPE
4862 results
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Clear Filters
histone modifications
binding sites
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
eQTL
differential activity
chromatin state
Fine-mapped variants
variant allelic effects
caQTL
hQTL
sQTL
variant to gene
meQTL
pQTL
other
representative DNase hypersensitivity sites
cell line
HeLa-S3
1
2
52
H1-hESC
1
2
1
38
8
K562
1
2
1
1
17
1
EndoC_BH1
1
1
8
1
8
3
breast cancer cell
11
9
+ See 735 more…
primary cell
monocyte
86
1
16
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
30
2
7
4
3
1
endothelial cell
1
2
15
7
9
1
2
2
fibroblast
1
16
4
2
6
hepatocyte
4
1
8
2
13
1
+ See 367 more…
tissue
islet of Langerhans
1
2
3
1
11
13
3
2
2
2
heart
1
1
5
18
1
3
1
retina
1
1
23
3
1
1
stomach
1
3
21
2
1
1
liver
2
1
4
6
3
1
7
1
2
1
+ See 233 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
1
7
adipocyte
1
1
4
2
4
1
4
embryonic stem cell
1
1
6
1
5
hematopoietic multipotent progenitor cell
1
1
1
9
1
cardiomyocytes
11
+ See 116 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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