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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1663
candidate regulatory elements
1351
target gene predictions
977
histone modifications
940
chromatin state
911
accessible chromatin
817
binding sites
682
gene expression
170
eQTL
167
differential activity
139
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
729
February, 2021
288
June, 2020
221
November, 2021
110
September, 2023
91
October, 2022
65
January, 2020
60
February, 2024
54
May, 2020
51
March, 2023
44
November, 2022
31
August, 2021
28
January, 2021
26
February, 2023
26
May, 2021
19
April, 2020
14
May, 2022
12
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2020
Available data
1718
bed bed3+
527
bigWig
158
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1850
Homo sapiens
Biosample type
816
cell line
735
primary cell
237
tissue
107
in vitro differentiated cells
Organ
347
epithelium
133
connective tissue
113
kidney
103
pancreas
75
vasculature
65
eye
58
bodily fluid
58
brain
57
blood
54
blood vessel
41
liver
35
musculature of body
31
heart
31
skin of body
27
intestine
25
embryo
24
lung
23
bone element
22
limb
20
lymph node
19
artery
19
mammary gland
16
large intestine
13
prostate gland
12
extraembryonic component
11
adipose tissue
10
penis
8
gonad
8
lymphatic vessel
8
skeleton
8
stomach
7
adrenal gland
7
placenta
7
uterus
5
bronchus
5
testis
5
vein
4
bone marrow
4
esophagus
4
spinal cord
4
ureter
3
nerve
3
small intestine
3
spleen
3
thymus
3
trachea
2
lymphoid tissue
2
ovary
thyroid gland
1
breast
1
mouth
1
nose
1
tongue
1
urinary bladder
Project
1507
AMP
221
ENCODE
110
KPMP
29
T1D
19
LungMap
9
community
Genome assembly (visualization)
1719
hg19
397
GRCh38
1
hg18
organ_slims!
thyroid gland
BIOSAMPLE
TYPE
1895 results
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Clear Filters
accessible chromatin
binding sites
differential activity
cell line
EndoC_BH1
8
1
3
breast cancer cell
9
fibroblast cell line
1
6
induced pluripotent stem cell
7
melanoma
7
+ See 542 more…
primary cell
monocyte
18
1
endothelial cell
15
2
fibroblast
16
1
endothelial cell of hepatic sinusoid
6
6
excitatory neuron
12
+ See 307 more…
tissue
retina
23
1
pigmented layer of retina
20
kidney
10
1
islet of Langerhans
6
2
heart
5
1
+ See 113 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
1
retinal pigment epithelial cell
6
SGBS preadipocytes
5
adipocyte
4
1
+ See 51 more…
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