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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1624
candidate regulatory elements
1326
target gene predictions
971
histone modifications
912
chromatin state
885
accessible chromatin
801
binding sites
657
gene expression
164
eQTL
155
differential activity
130
variant allelic effects
65
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
284
June, 2020
218
November, 2021
101
January, 2022
60
January, 2020
57
August, 2021
53
May, 2020
52
February, 2024
44
November, 2022
29
May, 2021
28
January, 2021
24
February, 2023
23
February, 2020
17
April, 2020
14
May, 2022
13
February, 2021
9
November, 2019
9
October, 2019
4
September, 2022
3
September, 2018
2
May, 2024
2
November, 2020
1
June, 2021
1
March, 2023
Available data
885
bed bed3+
509
bigWig
24
tsv
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1003
Homo sapiens
Biosample type
512
primary cell
296
tissue
172
cell line
69
in vitro differentiated cells
Organ
215
epithelium
109
connective tissue
80
pancreas
71
brain
60
eye
54
kidney
42
vasculature
34
musculature of body
blood vessel
32
heart
32
liver
25
limb
24
intestine
20
adipose tissue
16
artery
16
lung
16
skin of body
15
bone element
14
blood
14
bodily fluid
12
embryo
12
large intestine
10
extraembryonic component
9
stomach
8
adrenal gland
8
gonad
8
lymph node
8
skeleton
7
esophagus
7
mammary gland
6
prostate gland
5
nerve
5
placenta
4
lymphatic vessel
4
small intestine
4
spinal cord
4
testis
4
ureter
4
uterus
3
bronchus
3
ovary
3
penis
3
spleen
thyroid gland
2
bone marrow
2
breast
2
lymphoid tissue
2
mouth
2
thymus
2
vein
1
nose
1
pituitary gland
1
tongue
1
trachea
1
urinary bladder
1
vagina
Project
780
AMP
218
ENCODE
29
T1D
17
LungMap
3
ITG
2
community
Genome assembly (visualization)
937
hg19
492
GRCh38
3
hg18
organ_slims!
thyroid gland
blood vessel
BIOSAMPLE
TYPE
1049 results
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Clear Filters
accessible chromatin
eQTL
primary cell
monocyte
18
4
macrophage
12
7
fibroblast
16
2
endothelial cell
15
1
excitatory neuron
12
+ See 216 more…
tissue
retina
23
1
pigmented layer of retina
20
islet of Langerhans
6
13
kidney
10
1
liver
4
7
+ See 122 more…
cell line
EndoC_BH1
8
lymphoblastoid cell line
1
6
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 149 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
See all biosamples
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