Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
921
candidate regulatory elements
507
target gene predictions
503
chromatin state
195
accessible chromatin
89
histone modifications
88
eQTL
48
variant allelic effects
36
binding sites
3
pQTL
2
Fine-mapped variants
2
caQTL
2
gene expression
2
sQTL
2
variant to gene
1
other
Date released
1353
September, 2022
605
February, 2021
61
June, 2020
60
May, 2020
54
January, 2022
45
January, 2020
37
August, 2021
29
March, 2020
29
May, 2021
26
February, 2023
21
February, 2024
19
August, 2017
17
November, 2022
10
November, 2019
9
May, 2019
8
April, 2019
5
October, 2019
4
March, 2023
3
September, 2018
2
May, 2022
1
August, 2020
1
August, 2022
1
February, 2020
Available data
1821
bed bed3+
478
bed bed9
tsv
120
bigWig
31
bigBed bed9
1
bam
Organism
2400
Homo sapiens
Biosample type
2401
tissue
2330
cell line
1875
primary cell
395
in vitro differentiated cells
4
stem cell
Organ
292
musculature of body
291
kidney
283
brain
229
intestine
219
limb
187
heart
180
lung
132
large intestine
106
stomach
98
extraembryonic component
97
pancreas
80
small intestine
69
connective tissue
68
eye
66
blood vessel
66
vasculature
64
ureter
62
adipose tissue
61
adrenal gland
60
placenta
59
epithelium
51
liver
48
thymus
37
gonad
35
embryo
33
esophagus
33
spleen
32
artery
31
spinal cord
23
skin of body
ovary
19
nerve
thyroid gland
18
bone element
18
skeleton
17
lymphoid tissue
17
testis
14
prostate gland
12
breast
11
uterus
10
mouth
9
tongue
9
urinary bladder
9
vagina
3
bodily fluid
2
blood
2
mammary gland
2
penis
2
pituitary gland
Project
2396
AMP
5
ITG
Genome assembly (visualization)
2325
hg19
627
GRCh38
3
hg18
organ_slims!
thyroid gland
ovary
files.file_type!
tsv
BIOSAMPLE
TYPE
2401 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
variant allelic effects
binding sites
pQTL
Fine-mapped variants
caQTL
gene expression
sQTL
variant to gene
other
tissue
heart
37
20
21
5
1
2
1
stomach
40
21
19
3
1
1
kidney
29
14
16
10
2
1
1
1
brain
29
16
18
2
3
2
1
1
lung
33
17
16
1
+ See 228 more…
See all biosamples
Download