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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
Date released
65
September, 2022
46
February, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
November, 2021
1
March, 2020
1
October, 2022
Available data
127
bed bed3+
33
bed bed9
2
tsv
Organism
127
Homo sapiens
Biosample type
98
tissue
26
cell line
3
primary cell
Organ
338
epithelium
267
brain
260
kidney
254
musculature of body
242
connective tissue
224
lung
207
intestine
178
bodily fluid
169
blood
166
embryo
155
limb
152
skin of body
147
heart
127
large intestine
127
vasculature
103
extraembryonic component
97
blood vessel
96
pancreas
85
stomach
77
liver
73
uterus
66
mammary gland
61
small intestine
58
prostate gland
55
bone element
52
placenta
51
penis
50
adrenal gland
47
ureter
46
lymph node
42
adipose tissue
39
eye
36
thymus
35
artery
32
gonad
29
esophagus
27
spinal cord
24
spleen
17
testis
16
lymphoid tissue
15
ovary
thyroid gland
15
vein
12
mouth
11
bronchus
11
nerve
11
pituitary gland
10
lymphatic vessel
9
bone marrow
8
breast
7
skeleton
6
tongue
6
urinary bladder
6
vagina
4
trachea
2
nose
Project
124
AMP
3
ENCODE
Genome assembly (visualization)
127
hg19
5
GRCh38
organ_slims!
thyroid gland
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
127 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
chromatin state
tissue
large intestine
27
14
1
sigmoid colon
10
7
transverse colon
8
5
colonic mucosa
4
2
1
1
mucosa of rectum
4
2
1
+ See 4 more…
cell line
HT-29
2
2
1
1
HCT116
2
3
SW480
2
1
1
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
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