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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
228
candidate regulatory elements
204
gene expression
119
target gene predictions
113
chromatin state
60
accessible chromatin
56
differential activity
16
variant allelic effects
13
binding sites
11
histone modifications
6
eQTL
Date released
22
June, 2020
15
August, 2021
14
January, 2020
6
November, 2021
3
May, 2020
Available data
59
bed bed3+
38
bigWig
Organism
60
Homo sapiens
Biosample type
26
primary cell
24
tissue
9
cell line
1
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
tongue
1
trachea
1
urinary bladder
Project
54
AMP
6
ENCODE
Genome assembly (visualization)
59
hg19
30
GRCh38
organ_slims!
tongue
BIOSAMPLE
TYPE
60 results
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accessible chromatin
primary cell
colon epithelial cell
3
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
+ See 14 more…
tissue
kidney
10
renal pelvis
2
cortex of kidney
1
glomerular epithelium
1
large intestine
1
+ See 9 more…
cell line
ACHN
1
Caki2
1
HCT-116 cell
1
HEK293
1
HT-29
1
+ See 4 more…
in vitro differentiated cells
renal cell carcinoma
1
See all biosamples
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