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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
251
candidate regulatory elements
228
gene expression
140
target gene predictions
130
chromatin state
84
accessible chromatin
60
differential activity
26
binding sites
25
histone modifications
20
variant allelic effects
14
eQTL
3
Fine-mapped variants
1
caQTL
Date released
369
September, 2022
260
February, 2021
140
September, 2023
38
August, 2021
33
February, 2024
27
June, 2020
22
May, 2020
17
January, 2020
14
March, 2020
14
November, 2021
11
February, 2020
8
May, 2021
6
August, 2017
4
January, 2022
4
March, 2023
4
March, 2024
4
October, 2022
2
May, 2022
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
547
bed bed3+
281
tsv
124
bed bed9
87
txt
62
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
982
Homo sapiens
Biosample type
493
tissue
378
primary cell
103
cell line
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
828
AMP
140
KPMP
14
ENCODE
Genome assembly (visualization)
681
hg19
208
GRCh38
2
hg18
organ_slims!
tongue
BIOSAMPLE
TYPE
982 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
tissue
kidney
29
7
14
16
10
1
2
1
1
large intestine
27
14
13
1
1
liver
13
1
10
9
4
1
1
2
7
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
+ See 29 more…
primary cell
hepatocyte
1
13
3
1
8
1
4
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
2
5
1
1
2
+ See 69 more…
cell line
HepG2
2
3
2
2
3
5
HEK293
3
1
1
1
2
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 19 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
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