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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1560
candidate regulatory elements
1266
target gene predictions
951
histone modifications
811
accessible chromatin
786
binding sites
106
variant allelic effects
33
chromatin state
11
caQTL
7
eQTL
3
hQTL
2
meQTL
2
other
2
variant to gene
1
pQTL
1
sQTL
Date released
2305
February, 2021
1572
September, 2022
283
November, 2021
279
February, 2024
272
May, 2021
267
June, 2020
123
May, 2020
89
October, 2022
54
January, 2020
54
January, 2021
50
August, 2021
42
March, 2020
34
November, 2022
30
February, 2023
27
August, 2017
16
April, 2020
13
November, 2019
12
May, 2022
8
October, 2019
5
January, 2022
3
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
September, 2018
Available data
5542
bed bed3+
835
tsv
815
bed bed9
488
bigWig
101
txt
38
bigBed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5496
Homo sapiens
Biosample type
2097
cell line
1750
tissue
1387
primary cell
303
in vitro differentiated cells
3
stem cell
Organ
547
epithelium
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5185
AMP
283
ENCODE
58
T1D
16
LungMap
Genome assembly (visualization)
5535
hg19
730
GRCh38
1
hg18
organ_slims!
ureter
connective tissue
BIOSAMPLE
TYPE
5542 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
variant to gene
pQTL
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 748 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 205 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 292 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
T-cell acute lymphoblastic leukemia
5
3
embryonic stem cell
1
1
5
1
neuroblastoma cell line
6
2
+ See 92 more…
stem cell
H1-hESC
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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