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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
candidate regulatory elements
58
target gene predictions
47
chromatin state
12
accessible chromatin
7
binding sites
6
histone modifications
eQTL
2
gene expression
Date released
131
September, 2022
57
February, 2021
8
June, 2020
7
November, 2021
6
May, 2021
3
August, 2017
3
February, 2024
2
March, 2020
2
March, 2024
1
May, 2020
1
October, 2022
Available data
175
bed bed3+
44
bed bed9
4
bigWig
2
tsv
Organism
221
Homo sapiens
Biosample type
180
tissue
34
cell line
7
primary cell
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
214
AMP
7
ENCODE
Genome assembly (visualization)
219
hg19
53
GRCh38
organ_slims!
ureter
annotation_type!
eQTL
BIOSAMPLE
TYPE
221 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
tissue
large intestine
27
14
13
1
1
thymus
20
14
11
1
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
+ See 7 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
fetal thymocyte
1
See all biosamples
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