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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
251
gene expression
226
candidate regulatory elements
174
target gene predictions
127
accessible chromatin
119
chromatin state
89
differential activity
57
binding sites
36
histone modifications
27
variant allelic effects
21
eQTL
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
338
September, 2022
289
February, 2021
140
September, 2023
54
February, 2024
47
March, 2023
38
August, 2021
37
May, 2021
31
June, 2020
25
May, 2020
21
November, 2021
21
October, 2022
20
January, 2021
18
January, 2020
12
March, 2020
11
February, 2020
7
August, 2018
6
October, 2019
5
August, 2017
5
January, 2022
3
March, 2024
2
April, 2019
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
649
bed bed3+
328
tsv
113
bed bed9
93
bigWig
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
1136
Homo sapiens
Biosample type
444
primary cell
418
tissue
270
cell line
4
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
953
AMP
140
KPMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
779
hg19
217
GRCh38
organ_slims!
urinary bladder
BIOSAMPLE
TYPE
1136 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
sQTL
variant to gene
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
pancreatic ductal cell
3
3
6
3
1
2
1
pancreatic beta cell
3
3
8
3
1
pancreatic alpha cell
3
3
7
3
1
+ See 82 more…
tissue
kidney
7
29
14
10
16
1
2
1
1
islet of Langerhans
11
1
6
3
2
1
1
13
2
2
2
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 28 more…
cell line
K562
7
23
1
7
2
1
EndoC_BH1
8
1
8
3
1
GM12878
2
8
1
2
2
1
HEK293
3
1
1
1
2
1
GM06990
2
1
1
1
2
1
+ See 41 more…
in vitro differentiated cells
pancreatic ductal cell
3
renal cell carcinoma
1
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