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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
1226
target gene predictions
967
histone modifications
889
accessible chromatin
chromatin state
807
binding sites
678
gene expression
167
differential activity
167
eQTL
137
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1735
February, 2021
787
September, 2022
376
May, 2021
315
February, 2024
312
November, 2021
286
September, 2023
277
June, 2020
152
May, 2020
128
August, 2021
126
March, 2020
102
January, 2022
99
October, 2022
83
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
44
November, 2022
32
February, 2023
25
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4034
bed bed3+
895
tsv
532
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5101
Homo sapiens
Biosample type
1918
primary cell
1758
cell line
1121
tissue
347
in vitro differentiated cells
3
stem cell
Organ
796
epithelium
416
kidney
332
connective tissue
283
brain
236
pancreas
183
vasculature
155
musculature of body
144
bodily fluid
139
blood
137
blood vessel
134
heart
130
embryo
intestine
116
liver
109
lung
100
limb
94
skin of body
82
eye
uterus
69
large intestine
60
adipose tissue
57
artery
54
extraembryonic component
49
bone element
44
mammary gland
44
stomach
38
prostate gland
33
lymph node
31
adrenal gland
28
placenta
27
small intestine
26
penis
25
gonad
21
esophagus
20
ureter
19
spinal cord
18
thymus
15
lymphatic vessel
15
nerve
13
pituitary gland
13
spleen
13
testis
12
vein
11
ovary
11
skeleton
11
thyroid gland
10
bronchus
10
lymphoid tissue
9
bone marrow
7
mouth
6
breast
5
trachea
5
urinary bladder
4
tongue
4
vagina
2
nose
1
pericardium
Project
4461
AMP
312
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4171
hg19
924
GRCh38
4
hg18
organ_slims!
uterus
intestine
annotation_type!
chromatin state
candidate regulatory elements
BIOSAMPLE
TYPE
5149 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
5
30
4
3
endothelial cell
7
1
15
2
9
1
2
2
hepatocyte
3
4
8
1
13
2
fibroblast
4
16
1
2
6
+ See 431 more…
cell line
H1-hESC
39
1
1
2
8
K562
23
1
1
2
A549
19
1
1
2
EndoC_BH1
1
1
8
1
8
3
1
breast cancer cell
11
9
+ See 733 more…
tissue
islet of Langerhans
1
1
6
2
11
13
1
2
2
2
kidney
14
2
10
1
7
1
1
heart
20
1
5
1
3
2
retina
3
1
23
1
1
1
1
liver
10
2
4
1
1
1
7
1
+ See 228 more…
in vitro differentiated cells
neural progenitor cell
5
15
10
7
hematopoietic multipotent progenitor cell
10
1
1
1
1
adipocyte
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 115 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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