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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
889
accessible chromatin
504
gene expression
466
target gene predictions
167
differential activity
166
eQTL
139
variant allelic effects
131
histone modifications
111
chromatin state
97
binding sites
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
candidate regulatory elements
Date released
February, 2021
September, 2022
386
May, 2021
329
November, 2021
327
February, 2024
286
September, 2023
285
June, 2020
155
May, 2020
128
August, 2021
128
March, 2020
104
January, 2022
99
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
28
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
1772
bed bed3+
720
tsv
525
bigWig
40
bigBed bed9
36
bed bed9
34
bed bed9+
25
txt
24
csv
12
bigBed narrowPeak
1
bam
Organism
2734
Homo sapiens
Biosample type
1521
primary cell
626
tissue
453
cell line
176
in vitro differentiated cells
4
stem cell
Organ
602
epithelium
239
kidney
231
connective tissue
202
pancreas
176
brain
142
vasculature
108
blood vessel
99
heart
84
liver
81
embryo
79
musculature of body
69
bodily fluid
68
blood
65
eye
uterus
54
intestine
48
limb
42
adipose tissue
39
artery
34
skin of body
31
lung
30
large intestine
21
stomach
17
adrenal gland
17
mammary gland
14
esophagus
14
extraembryonic component
14
gonad
13
nerve
12
pituitary gland
11
bone element
11
lymph node
10
lymphatic vessel
10
prostate gland
10
spinal cord
10
vein
9
small intestine
7
ovary
placenta
7
thyroid gland
7
ureter
6
penis
6
spleen
6
testis
5
bone marrow
5
bronchus
5
thymus
4
breast
4
lymphoid tissue
3
mouth
3
urinary bladder
2
tongue
2
vagina
1
nose
1
pericardium
1
trachea
Project
2077
AMP
329
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
1977
hg19
964
GRCh38
4
hg18
organ_slims!
uterus
placenta
month_released!
February, 2021
September, 2022
BIOSAMPLE
TYPE
2782 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
histone modifications
chromatin state
binding sites
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
candidate regulatory elements
primary cell
monocyte
18
15
2
4
84
2
1
1
CD8-positive, alpha-beta T cell
4
3
5
30
1
endothelial cell
15
5
7
1
2
2
fibroblast
16
4
2
6
1
macrophage
12
2
3
7
3
1
+ See 352 more…
tissue
islet of Langerhans
5
5
1
12
1
3
1
2
2
2
retina
23
1
1
1
pigmented layer of retina
20
liver
4
1
3
1
7
2
1
subcutaneous adipose tissue
2
2
1
5
1
1
3
+ See 170 more…
cell line
H1-hESC
1
8
38
1
EndoC_BH1
8
8
1
3
1
K562
1
17
1
1
HFFc6
19
GM12878
1
7
1
1
+ See 205 more…
in vitro differentiated cells
neural progenitor cell
10
7
1
14
adipocyte
4
4
4
embryonic stem cell
6
1
5
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
9
+ See 58 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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