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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
968
histone modifications
837
accessible chromatin
830
candidate regulatory elements
810
binding sites
663
gene expression
466
target gene predictions
170
eQTL
167
differential activity
139
variant allelic effects
104
chromatin state
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2573
February, 2021
September, 2022
386
May, 2021
331
November, 2021
327
February, 2024
286
June, 2020
286
September, 2023
153
May, 2020
128
August, 2021
127
March, 2020
105
January, 2022
99
October, 2022
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
34
August, 2017
32
February, 2023
27
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4098
bed bed3+
880
tsv
475
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
30
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
5217
Homo sapiens
Biosample type
1944
primary cell
1751
cell line
1202
tissue
362
in vitro differentiated cells
4
stem cell
Organ
784
epithelium
413
kidney
330
connective tissue
257
brain
229
pancreas
175
vasculature
166
musculature of body
143
bodily fluid
138
blood
135
heart
134
embryo
133
blood vessel
125
intestine
107
liver
102
skin of body
101
lung
99
limb
80
eye
76
large intestine
uterus
61
adipose tissue
50
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
24
esophagus
22
ureter
18
spinal cord
16
spleen
16
thymus
15
lymphatic vessel
15
nerve
vein
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4558
AMP
331
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4300
hg19
909
GRCh38
4
hg18
organ_slims!
uterus
vein
month_released!
January, 2020
September, 2022
BIOSAMPLE
TYPE
5265 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
2
9
7
1
2
2
fibroblast
16
1
4
2
6
hepatocyte
4
7
1
13
2
2
+ See 438 more…
cell line
H1-hESC
1
1
2
8
38
EndoC_BH1
1
8
1
8
1
3
1
K562
1
1
1
2
17
1
breast cancer cell
11
9
HFFc6
19
+ See 743 more…
tissue
islet of Langerhans
1
5
2
11
13
1
3
2
2
2
kidney
2
8
15
1
7
1
1
2
heart
1
3
18
1
3
1
2
2
retina
1
22
3
1
1
1
1
stomach
1
3
21
1
2
1
+ See 251 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 119 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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