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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1503
candidate regulatory elements
1224
target gene predictions
969
histone modifications
860
accessible chromatin
806
binding sites
479
gene expression
164
eQTL
124
variant allelic effects
111
differential activity
75
chromatin state
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2392
February, 2021
1520
September, 2022
382
May, 2021
328
November, 2021
326
February, 2024
272
June, 2020
146
September, 2023
133
May, 2020
125
March, 2020
104
January, 2022
100
August, 2021
98
October, 2022
70
March, 2023
69
January, 2020
56
January, 2021
55
February, 2020
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
26
March, 2024
19
April, 2020
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5538
bed bed3+
bed bed9
645
tsv
509
bigWig
38
bigBed bed9
34
bed bed9+
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
6378
Homo sapiens
Biosample type
2077
cell line
2000
primary cell
1914
tissue
429
in vitro differentiated cells
4
stem cell
Organ
899
epithelium
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5864
AMP
328
ENCODE
141
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5709
hg19
925
GRCh38
4
hg18
organ_slims!
uterus
kidney
files.file_type!
bed bed9
BIOSAMPLE
TYPE
6426 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
variant allelic effects
differential activity
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
1
3
MCF-7
9
6
2
1
3
+ See 751 more…
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 378 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 237 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 120 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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