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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1611
candidate regulatory elements
1269
target gene predictions
974
histone modifications
chromatin state
902
accessible chromatin
813
binding sites
679
gene expression
169
eQTL
167
differential activity
138
variant allelic effects
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2551
February, 2021
1624
September, 2022
380
May, 2021
322
November, 2021
320
February, 2024
286
September, 2023
284
June, 2020
152
May, 2020
128
August, 2021
104
January, 2022
100
October, 2022
83
January, 2020
68
March, 2023
64
February, 2020
56
January, 2021
55
March, 2020
44
November, 2022
32
February, 2023
26
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5715
bed bed3+
824
tsv
538
bigWig
108
txt
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6711
Homo sapiens
Biosample type
2258
primary cell
2099
cell line
1971
tissue
426
in vitro differentiated cells
3
stem cell
Organ
896
epithelium
575
kidney
406
connective tissue
358
brain
295
musculature of body
255
pancreas
240
lung
230
intestine
224
vasculature
195
heart
191
bodily fluid
187
embryo
185
limb
182
blood
169
skin of body
167
blood vessel
138
large intestine
136
liver
113
extraembryonic component
100
eye
stomach
uterus
74
bone element
73
adipose tissue
72
mammary gland
65
prostate gland
64
small intestine
61
artery
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
32
spinal cord
28
spleen
22
testis
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
nerve
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
6061
AMP
322
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5780
hg19
866
GRCh38
4
hg18
organ_slims!
uterus
stomach
annotation_type!
Fine-mapped variants
chromatin state
BIOSAMPLE
TYPE
6759 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 438 more…
cell line
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
EndoC_BH1
1
1
8
1
8
3
1
MCF-7
9
6
2
1
3
+ See 762 more…
tissue
heart
37
20
1
5
1
3
2
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 250 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 121 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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