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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
356
candidate regulatory elements
267
gene expression
267
target gene predictions
251
accessible chromatin
183
chromatin state
93
differential activity
56
binding sites
48
variant allelic effects
41
histone modifications
13
eQTL
6
Fine-mapped variants
4
caQTL
Date released
513
September, 2022
356
February, 2021
155
September, 2023
142
November, 2021
94
February, 2024
46
May, 2021
41
June, 2020
38
March, 2023
24
August, 2021
20
January, 2021
20
May, 2020
19
January, 2020
17
March, 2020
15
February, 2020
15
November, 2022
12
February, 2023
10
October, 2022
9
August, 2017
7
April, 2020
7
March, 2024
6
August, 2018
6
October, 2019
5
May, 2022
4
January, 2022
2
May, 2019
1
July, 2020
1
November, 2019
Available data
1030
bed bed3+
341
tsv
194
bigWig
174
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1585
Homo sapiens
Biosample type
873
primary cell
593
tissue
91
cell line
28
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1259
AMP
155
KPMP
142
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1222
hg19
392
GRCh38
organ_slims!
uterus
BIOSAMPLE
TYPE
1585 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
7
15
2
2
1
1
2
hepatocyte
1
13
3
8
1
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
6
4
2
5
2
1
+ See 156 more…
tissue
muscle of arm
33
16
1
16
1
small intestine
29
17
1
15
1
muscle of leg
27
14
2
15
large intestine
27
14
1
13
1
muscle of back
28
13
13
+ See 55 more…
cell line
EndoC_BH1
8
1
8
3
1
HT-29
2
2
1
1
1
1
LHCN-M2
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 16 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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